Publications

Altmüller, J., …, Nürnberg, P. A systematic comparison of two new releases of exome sequencing products: the aim of use determines the choice of product. Biol. Chem. 397, 791–801 (2016).

Hackl, Á., …, Habbig, S., …, Weber, L. T. Mycophenolate Mofetil Therapy in Children With Idiopathic Nephrotic Syndrome: Does Therapeutic Drug Monitoring Make a Difference? Ther. Drug. Monit. 38, 274–279 (2016).

Cheng, J., Metge, F., Dieterich, C. Specific identification and quantification of circular RNAs from sequencing data. Bioinformatics 32, 1094–1096 (2016).

Büscher, A. K., Beck, B. B., …,Weber, L. T., …, Weber, S., German Pediatric Nephrology Association (GPN). Rapid Response to Cyclosporin A and Favorable Renal Outcome in Nongenetic Versus Genetic Steroid-Resistant Nephrotic Syndrome. Clin. J. Am. Soc. Nephrol. 11, 245–253 (2016).

Valluy, J., …, Dieterich, C., Wöhr, M., Schwarting, R., Schratt, G. A coding-independent function of an alternative Ube3a transcript during neuronal development. Nat. Neurosci. 18, 666–673 (2015).

Ising, C., …, Hohne, M., Baris, O. R., Hagmann, H., Kann, M., …, Schermer, B., Linkermann, A., Bruning, J. C., Kurschat, C. E., Muller, R.-U., Wiesner, R. J., Langer, T., Benzing, T., Brinkkoetter, P. T. Inhibition of insulin/IGF-1 receptor signaling protects from mitochondria-mediated kidney failure. EMBO Mol. Med. 7, 275–287 (2015).

Edifizi, D., Schumacher, B. Genome Instability in Development and Aging: Insights from Nucleotide Excision Repair in Humans, Mice, and Worms. Biomolecules 5, 1855–1869 (2015).

Bartram, M., Dafinger, C., Habbig, S., Benzing, T., Schermer, B., Müller, R. Loss of Dgcr8-mediated microRNA expression in the kidney results in hydronephrosis and renal malformation. BMC Nephrol. 16, 55 (2015).

Kann, M., …, Schermer, B., Benzing, T., Kreidberg, J. Genome-Wide Analysis of Wilms’ Tumor 1-Controlled Gene Expression in Podocytes Reveals Key Regulatory Mechanisms. J Am Soc Nephrol. 26, 2097–104 (2015).

Kann, M., …, Schermer, B., Benzing, T., Fan, C., Kreidberg, J. WT1 targets Gas1 to maintain nephron progenitor cells by modulating FGF signals. Development. 142, 1254–66 (2015).

Rinschen, M., Benzing, T., Limbutara, K., Pisitkun, T. Proteomic analysis of the kidney filtration barrier-Problems and perspectives. Proteomics Clin Appl. 9, 1053–68 (2015).

Blin, K., Dieterich, C., …, Akalin, A. DoRiNA 2.0--upgrading the doRiNA database of RNA interactions in post-transcriptional regulation. Nucleic Acids Res. 43, D160-167 (2015).

Ivanov, A., …, Dieterich, C., Rajewsky, N. Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals. Cell Rep 10, 170–177 (2015).

Mueller, M. M., …, Müller, R.-U., …, Benzing, T., Schermer, B., Schumacher, B. DAF-16/FOXO and EGL-27/GATA promote developmental growth in response to persistent somatic DNA damage. Nat. Cell Biol. 16, 1168–1179 (2014).

Kohli, P., Bartram, M. P., Habbig, S., Pahmeyer, C., Lamkemeyer, T., Benzing, T., Schermer, B., Rinschen, M. M. Label-free quantitative proteomic analysis of the YAP/TAZ interactome. Am. J. Physiol.-Cell Physiol. 306, C805–C818 (2014).

Peti-Peterdi, J., Burford, J. L., Hackl, M. J. Can Kidney Regeneration Be Visualized? Nephron Exp. Nephrol 126, 86–90 (2014).

Rinschen, M. M., …, Schermer, B., …, Brinkkoetter, P. T., Benzing, T. Phosphoproteomic Analysis Reveals Regulatory Mechanisms at the Kidney Filtration Barrier. J. Am. Soc. Nephrol. 25, 1509–1522 (2014).

Burford, J., …, Hackl, M., Pippin, J., Shankland, S., Peti-Peterdi, J. Intravital imaging of podocyte calcium in glomerular injury and disease. J Clin Invest. 124, 2050–8 (2014).

Höhne, M., …, Schermer, B., Brinkkoetter, P. T., Benzing, T. Light Microscopic Visualization of Podocyte Ultrastructure Demonstrates Oscillating Glomerular Contractions. Am. J. Pathol. 182, 332–338 (2013).

Brinkkoetter, P. T., Ising, C., Benzing, T. The role of the podocyte in albumin filtration. Nat Rev Nephrol 9, 328–336 (2013).

Schermer, B., …, Schumacher, B., Nürnberg, P., Dollé, M. E., Benzing, T., Müller, R.-U., Kurschat, C. E. Transcriptional profiling reveals progeroid Ercc1 -/Δ mice as a model system for glomerular aging. BMC Genomics 14, 559 (2013).

Hackl, M. J., …, Schermer, B., Benzing, T., Peti-Peterdi, J. Tracking the fate of glomerular epithelial cells in vivo using serial multiphoton imaging in new mouse models with fluorescent lineage tags. Nat. Med. 19, 1661–1666 (2013).

Ermolaeva, M. A., …, Schumacher, B. DNA damage in germ cells induces an innate immune response that triggers systemic stress resistance. Nature 501, 416–420 (2013).

Sikora-Wohlfeld, W., …, Beyer, A. Assessing Computational Methods for Transcription Factor Target Gene Identification Based on ChIP-seq Data. PLoS Comput. Biol. 9, (2013).

Frank, V., Habbig, S., …, Benzing, T., …, Schermer, B., Bergmann, C. Mutations in NEK8 link multiple organ dysplasia with altered Hippo signalling and increased c-MYC expression. Hum. Mol. Genet. 22, 2177–2185 (2013).